[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 26 items for (author: mendonca & l)

EMDB-29607:
HIV-2 Gag Capsid from Immature Virus-like Particles
Method: single particle / : Talledge N, Zhang W, Mansky LM

EMDB-29606:
CryoET of HIV-2 Immature Particles
Method: electron tomography / : Talledge N, Zhang W, Mansky ML

EMDB-16403:
Subtomogram averaging of a coronavirus spike (ChAdOx1 19E6) in C3 symmetry
Method: subtomogram averaging / : Ni T, Mendonca L, Zhu Y, Zhang P

EMDB-16404:
Subtomogram averaging of a coronavirus spike (ChAdOx1 19E6) in C1 symmetry
Method: subtomogram averaging / : Ni T, Mendonca L, Zhu Y, Zhang P

EMDB-16405:
Subtomogram averaging of a coronavirus spike (ChAdOx1 19E) in C3 symmetry
Method: subtomogram averaging / : Ni T, Mendonca L, Zhu Y, Zhang P

EMDB-16406:
Subtomogram averaging of a coronavirus spike in situ (ChAdOx1 19E) in C1 symmetry
Method: subtomogram averaging / : Ni T, Mendonca L, Zhu Y, Zhang P

EMDB-16697:
Subtomogram averaging of a coronavirus spike (ChAdOx1 19E6) in C1 symmetry after 3D classification
Method: subtomogram averaging / : Ni T, Mendonca L, Zhu Y, Zhang P

EMDB-13271:
Subtomogram averaging of apoferritin at 2.86 angstrom resolution
Method: subtomogram averaging / : Ni T, Mendonca L, Frosio T, Sheng Y, Clare D, Himes B, Zhang P

EMDB-13354:
A 3.3 Angstrom structure of HIV-1 CA-SP1 by subtomogram averaging (5 tilt-series)
Method: subtomogram averaging / : Ni T, Mendonca L, Frosio T, Sheng Y, Clare D, Himes B, Zhang P

EMDB-13364:
UVC treated Human apoferritin
Method: single particle / : Renault L, Depelteau JS, Briegel A

EMDB-13402:
Cryo-EM map of UVC-treated ICP1 Bacteriophage capsid
Method: single particle / : Depelteau JS, Briegel A

EMDB-13403:
Cryo-EM map of WT ICP1 bacteriophage capsid
Method: single particle / : Depelteau JS, Briegel A

EMDB-13390:
subtomogram averaging of a HIV-1 immature Gag at 4.5 angstrom resolution
Method: subtomogram averaging / : Ni T, Mendonca L, Frosio T, Sheng Y, Clare D, Himes B, Zhang P

EMDB-11899:
HIV-1 Gag immature lattice. GagdeltaMASP1T8I with IP-6
Method: subtomogram averaging / : Mendonca L, Zhang P

EMDB-13270:
Subtomogram averaging of E. coli ribosome at 7 angstrom resolution
Method: subtomogram averaging / : Ni T, Mendonca L, Frosio T, Sheng Y, Clare D, Himes B, Zhang P

EMDB-23698:
Human Septin Hexameric Complex SEPT2G/SEPT6/SEPT7 by Single Particle Cryo-EM
Method: single particle / : Mendonca DC, Pereira HM, van Heel M, Portugal RV, Garratt RC

PDB-7m6j:
Human Septin Hexameric Complex SEPT2G/SEPT6/SEPT7 by Single Particle Cryo-EM
Method: single particle / : Mendonca DC, Pereira HM, van Heel M, Portugal RV, Garratt RC

EMDB-12991:
SARS-CoV-2 spike subtomogram average from extracelullar viruses
Method: subtomogram averaging / : Mendonca L, Zhang P

EMDB-12992:
SARS-CoV-2 spike subtomogram average from intracelullar viruses
Method: subtomogram averaging / : Mendonca L, Zhang P

EMDB-11894:
HIV-1 Gag immature lattice. GagdeltaMASP1T8I
Method: subtomogram averaging / : Mendonca L, Zhang P

EMDB-11897:
HIV-1 Gag immature lattice. GagSP1T8I
Method: subtomogram averaging / : Mendonca L, Zhang P

PDB-7ash:
HIV-1 Gag immature lattice. GagdeltaMASP1T8I
Method: subtomogram averaging / : Mendonca L, Zhang P

PDB-7asl:
HIV-1 Gag immature lattice. GagSP1T8I
Method: subtomogram averaging / : Mendonca L, Zhang P

EMDB-12287:
HIV-1 Gag T8I NC-RNA layer
Method: subtomogram averaging / : Mendonca L, Zhang P

EMDB-12530:
Subtomogram average of ChAdOx1 nCoV-19/AZD1222 derived SARS-CoV-2 spike glycoprotein
Method: subtomogram averaging / : Watanabe Y, Mendonca LM, Allen ER, Howe A, Lee M, Allen JD, Chawla H, Pulido D, Donnellan F, Davies H, Ulaszewska M, Belij-Rammerstorfer S, Morris S, Krebs AS, Dejnirattisai W, Mongkolsapaya J, Supasa P, Screaton GR, Green CM, Lambe T, Zhang P, Gilbert SC, Crispin M

EMDB-11627:
Subtomogram average of beta-propiolactone-treated SARS-CoV-2 post-fusion spike
Method: subtomogram averaging / : Mendonca LM, Liu C, Yang Y, Gao Y, Shen C, Liu J, Ni T, Ju B, Tang X, Wei J, Ma X, Zhu Y, Liu W, Xu S, Liu Y, Yuan J, Wu J, Liu Z, Zhang Z, Liu L, Wang P, Zhang P

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more